Citation

BibTex format

@article{Wilderen:2009,
author = {Wilderen, LJGWV and Clark, IP and Towrie, M and Thor, JJV and van, Thor JJ},
journal = {J Phys Chem B},
pages = {16354--16364},
title = {Mid-infrared picosecond pump-dump-probe and pump-repump-probe experiments to resolve a ground-state intermediate in cyanobacterial phytochrome Cph1},
url = {http://pubs.acs.org/doi/abs/10.1021/jp9038539},
volume = {113},
year = {2009}
}

RIS format (EndNote, RefMan)

TY  - JOUR
AB - Multipulse picosecond mid-infrared spectroscopy has been used to study photochemical reactions of the cyanobacterial phytochrome photoreceptor Cph1. Different photophysical schemes have been discussed in the literature to describe the pathways after photoexcitation, particularly, to identify reaction phases that are linked to photoisomerisation and electronic decay in the 1566-1772 cm(-1) region that probes C=C and C=O stretching modes of the tetrapyrrole chromophore. Here, multipulse spectroscopy is employed, where, compared to conventional visible pump-mid-infrared probe spectroscopy, an additional visible pulse is incorporated that interacts with populations that are evolving on the excited- and ground-state potential energy surfaces. The time delays between the pump and the dump pulse are chosen such that the dump pulse interacts with different phases in the reaction process. The pump and dump pulses are at the same wavelength, 640 nm, and are resonant with the Pr ground state as well as with the excited state and intermediates. Because the dump pulse additionally pumps the remaining, partially recovered, and partially oriented ground-state population, theory is developed for estimating the fraction of excited-state molecules. The calculations take into account the model-dependent ground-state recovery fraction, the angular dependence of the population transfer resulting from the finite bleach that occurs with linearly polarized intense femtosecond optical excitation, and the partially oriented population for the dump field. Distinct differences between the results from the experiments that use a 1 or a 14 ps dump time favor a branching evolution from S1 to an excited state or reconfigured chromophore and to a newly identified ground-state intermediate (GSI). Optical dumping at 1 ps shows the instantaneous induced absorption of a delocalized C=C stretching mode at 1608 cm(-1), where the increased cross section is associated with the electronic ground-state struc
AU - Wilderen,LJGWV
AU - Clark,IP
AU - Towrie,M
AU - Thor,JJV
AU - van,Thor JJ
EP - 16364
PY - 2009///
SP - 16354
TI - Mid-infrared picosecond pump-dump-probe and pump-repump-probe experiments to resolve a ground-state intermediate in cyanobacterial phytochrome Cph1
T2 - J Phys Chem B
UR - http://pubs.acs.org/doi/abs/10.1021/jp9038539
VL - 113
ER -

Centre for Structural Biology Open Day

Join us for our Open Day on 16 May 2024 - find out more!